BEID: Database for sequence-structure-function information on antigen-antibody interactions
نویسندگان
چکیده
منابع مشابه
BEID: Database for sequence-structure-function information on antigen-antibody interactions
The B-cell Epitope Interaction Database (BEID; http://datam.i2r.a-star.edu.sg/BEID) is an open-access database describing sequence-structure-function information on immunoglobulin (Ig)-antigen interactions. The current version of the database contains 164 antigens, 126 Ig and 189 Ig-antigen complexes extracted from the Protein Data Bank (PDB). Each entry is manually verified, classified, and an...
متن کاملMPID: MHC-Peptide Interaction Database for sequence-structure-function information on peptides binding to MHC molecules
SUMMARY Binding of short antigenic peptides to Major histocompatibility complex (MHC) proteins is the first step in T-cell mediated immune response. To understand the structural principles governing MHC-specific peptide recognition and binding, we have developed the MHC-Peptide Interaction Database (MPID), containing sequence-structure-function information. MPID (version 1.2) contains curated x...
متن کاملPROFESS: a PROtein Function, Evolution, Structure and Sequence database
The proliferation of biological databases and the easy access enabled by the Internet is having a beneficial impact on biological sciences and transforming the way research is conducted. There are approximately 1100 molecular biology databases dispersed throughout the Internet. To assist in the functional, structural and evolutionary analysis of the abundant number of novel proteins continually...
متن کاملA scoring function development for protein structure classification based on sequence and structure information
This project is to combine sequence and structure information of proteins to set up scoring function to classify protein structures whose belongings are unknown. The scoring function is basically explained as distance between two proteins. We began this project with searching useful informations and construct geometric and topological representations and distance metrics of those useful informa...
متن کاملStructure-Templated Predictions of Novel Protein Interactions from Sequence Information
The multitude of functions performed in the cell are largely controlled by a set of carefully orchestrated protein interactions often facilitated by specific binding of conserved domains in the interacting proteins. Interacting domains commonly exhibit distinct binding specificity to short and conserved recognition peptides called binding profiles. Although many conserved domains are known in n...
متن کاملذخیره در منابع من
با ذخیره ی این منبع در منابع من، دسترسی به آن را برای استفاده های بعدی آسان تر کنید
ژورنال
عنوان ژورنال: Bioinformation
سال: 2008
ISSN: 0973-8894,0973-2063
DOI: 10.6026/97320630003058